STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBI_03063alpha-N-arabinofuranosidase. (488 aa)    
Predicted Functional Partners:
SBI_09138
Putative glycosyl hydrolase/xylanase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
   
 0.875
SBI_08582
Putative glycosyl hydrolase/xylanase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
   
 0.873
SBI_08546
Putative glycosyl hydrolase/xylanase.
   
 0.866
SBI_03062
COG3693 Beta-1,4-xylanase.
 
   0.807
SBI_02187
Esterase, PHB depolymerase family protein; COG3509 Poly(3-hydroxybutyrate) depolymerase.
 
 
   0.775
SBI_09137
Putative glycosyl hydrolase; COG3693 Beta-1,4-xylanase.
 
 0.772
SBI_05611
Secreted endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
     0.728
SBI_03682
Secreted lyase.
 
     0.704
nrps6-4
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.701
SBI_06449
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.701
Your Current Organism:
Streptomyces bingchenggensis
NCBI taxonomy Id: 749414
Other names: S. bingchenggensis BCW-1, Streptomyces bingchenggensis BCW-1, Streptomyces bingchenggensis str. BCW-1, Streptomyces bingchenggensis strain BCW-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.