Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SBI_00523 | SBI_00672 | COG3321 Polyketide synthase modules and related proteins; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Hypothetical protein; COG3321 Polyketide synthase modules and related proteins; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.593 |
SBI_00523 | SBI_05246 | COG3321 Polyketide synthase modules and related proteins; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Oxidoreductase; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases. | 0.469 |
SBI_00672 | SBI_00523 | Hypothetical protein; COG3321 Polyketide synthase modules and related proteins; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | COG3321 Polyketide synthase modules and related proteins; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.593 |
SBI_00672 | SBI_05246 | Hypothetical protein; COG3321 Polyketide synthase modules and related proteins; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Oxidoreductase; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases. | 0.580 |
SBI_03923 | SBI_05246 | Dehydrogenase; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases. | Oxidoreductase; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases. | 0.699 |
SBI_05246 | SBI_00523 | Oxidoreductase; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases. | COG3321 Polyketide synthase modules and related proteins; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.469 |
SBI_05246 | SBI_00672 | Oxidoreductase; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases. | Hypothetical protein; COG3321 Polyketide synthase modules and related proteins; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.580 |
SBI_05246 | SBI_03923 | Oxidoreductase; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases. | Dehydrogenase; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases. | 0.699 |
SBI_05246 | SBI_05247 | Oxidoreductase; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases. | Putative transcriptional regulator. | 0.531 |
SBI_05246 | SBI_05248 | Oxidoreductase; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases. | Putative isochorismatase; COG1335 Amidases related to nicotinamidase. | 0.410 |
SBI_05247 | SBI_05246 | Putative transcriptional regulator. | Oxidoreductase; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases. | 0.531 |
SBI_05247 | SBI_05248 | Putative transcriptional regulator. | Putative isochorismatase; COG1335 Amidases related to nicotinamidase. | 0.545 |
SBI_05248 | SBI_05246 | Putative isochorismatase; COG1335 Amidases related to nicotinamidase. | Oxidoreductase; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases. | 0.410 |
SBI_05248 | SBI_05247 | Putative isochorismatase; COG1335 Amidases related to nicotinamidase. | Putative transcriptional regulator. | 0.545 |