STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pbp5Penicillin-binding protein; COG0744 Membrane carboxypeptidase (penicillin-binding protein). (784 aa)    
Predicted Functional Partners:
SBI_07873
Putative cell wall biosynthesis protein; COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
 
 
 0.739
SBI_07886
COG3599 Cell division initiation protein.
   
 
 0.735
SBI_07120
COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family.
 
 
 
 0.706
ftsW
COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family.
  
  
 0.699
mltG
Putative aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
 
   
 0.677
SBI_03283
Putative peptidase; COG0739 Membrane proteins related to metalloendopeptidases.
  
   
 0.635
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
 
  
 0.622
SBI_03462
COG0681 Signal peptidase I; Belongs to the peptidase S26 family.
  
     0.620
SBI_04832
Secreted peptidase; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
 
   
 0.616
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
   
 0.612
Your Current Organism:
Streptomyces bingchenggensis
NCBI taxonomy Id: 749414
Other names: S. bingchenggensis BCW-1, Streptomyces bingchenggensis BCW-1, Streptomyces bingchenggensis str. BCW-1, Streptomyces bingchenggensis strain BCW-1
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