Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SBI_04928 | SBI_07203 | SBI_04928 | SBI_07203 | COG3973 Superfamily I DNA and RNA helicases. | Hypothetical protein. | 0.448 |
SBI_05390 | SBI_06563 | SBI_05390 | SBI_06563 | Putative integral membrane protein. | Hypothetical protein. | 0.729 |
SBI_05390 | SBI_07054 | SBI_05390 | SBI_07054 | Putative integral membrane protein. | COG0629 Single-stranded DNA-binding protein. | 0.627 |
SBI_05390 | SBI_07203 | SBI_05390 | SBI_07203 | Putative integral membrane protein. | Hypothetical protein. | 0.487 |
SBI_05390 | SBI_08740 | SBI_05390 | SBI_08740 | Putative integral membrane protein. | Hypothetical protein; COG0789 Predicted transcriptional regulators. | 0.713 |
SBI_05717 | SBI_07203 | SBI_05717 | SBI_07203 | COG3145 Alkylated DNA repair protein. | Hypothetical protein. | 0.580 |
SBI_05717 | SBI_07956 | SBI_05717 | SBI_07956 | COG3145 Alkylated DNA repair protein. | Beta-lactamase domain protein; COG0491 Zn-dependent hydrolases, including glyoxylases. | 0.553 |
SBI_06563 | SBI_05390 | SBI_06563 | SBI_05390 | Hypothetical protein. | Putative integral membrane protein. | 0.729 |
SBI_06563 | SBI_07054 | SBI_06563 | SBI_07054 | Hypothetical protein. | COG0629 Single-stranded DNA-binding protein. | 0.705 |
SBI_06563 | SBI_07203 | SBI_06563 | SBI_07203 | Hypothetical protein. | Hypothetical protein. | 0.499 |
SBI_06563 | SBI_08740 | SBI_06563 | SBI_08740 | Hypothetical protein. | Hypothetical protein; COG0789 Predicted transcriptional regulators. | 0.767 |
SBI_07054 | SBI_05390 | SBI_07054 | SBI_05390 | COG0629 Single-stranded DNA-binding protein. | Putative integral membrane protein. | 0.627 |
SBI_07054 | SBI_06563 | SBI_07054 | SBI_06563 | COG0629 Single-stranded DNA-binding protein. | Hypothetical protein. | 0.705 |
SBI_07054 | SBI_07203 | SBI_07054 | SBI_07203 | COG0629 Single-stranded DNA-binding protein. | Hypothetical protein. | 0.425 |
SBI_07054 | SBI_08740 | SBI_07054 | SBI_08740 | COG0629 Single-stranded DNA-binding protein. | Hypothetical protein; COG0789 Predicted transcriptional regulators. | 0.761 |
SBI_07202 | SBI_07203 | SBI_07202 | SBI_07203 | Hypothetical protein. | Hypothetical protein. | 0.465 |
SBI_07203 | SBI_04928 | SBI_07203 | SBI_04928 | Hypothetical protein. | COG3973 Superfamily I DNA and RNA helicases. | 0.448 |
SBI_07203 | SBI_05390 | SBI_07203 | SBI_05390 | Hypothetical protein. | Putative integral membrane protein. | 0.487 |
SBI_07203 | SBI_05717 | SBI_07203 | SBI_05717 | Hypothetical protein. | COG3145 Alkylated DNA repair protein. | 0.580 |
SBI_07203 | SBI_06563 | SBI_07203 | SBI_06563 | Hypothetical protein. | Hypothetical protein. | 0.499 |
page 1 of 2