Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SBI_01215 | SBI_08579 | SBI_01215 | SBI_08579 | Hydrolase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | Transposase IS4 family protein; COG3666 Transposase and inactivated derivatives. | 0.467 |
SBI_01277 | SBI_08579 | SBI_01277 | SBI_08579 | COG3547 Transposase and inactivated derivatives. | Transposase IS4 family protein; COG3666 Transposase and inactivated derivatives. | 0.520 |
SBI_01616 | SBI_08579 | SBI_01616 | SBI_08579 | IS116/IS110/IS902 family transposase; COG3547 Transposase and inactivated derivatives. | Transposase IS4 family protein; COG3666 Transposase and inactivated derivatives. | 0.436 |
SBI_01616 | ozmE | SBI_01616 | SBI_09655 | IS116/IS110/IS902 family transposase; COG3547 Transposase and inactivated derivatives. | COG0236 Acyl carrier protein. | 0.450 |
SBI_03184 | SBI_08579 | SBI_03184 | SBI_08579 | Hypothetical protein. | Transposase IS4 family protein; COG3666 Transposase and inactivated derivatives. | 0.549 |
SBI_08578 | SBI_08579 | SBI_08578 | SBI_08579 | Integrase catalytic region; COG2801 Transposase and inactivated derivatives. | Transposase IS4 family protein; COG3666 Transposase and inactivated derivatives. | 0.439 |
SBI_08579 | SBI_01215 | SBI_08579 | SBI_01215 | Transposase IS4 family protein; COG3666 Transposase and inactivated derivatives. | Hydrolase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | 0.467 |
SBI_08579 | SBI_01277 | SBI_08579 | SBI_01277 | Transposase IS4 family protein; COG3666 Transposase and inactivated derivatives. | COG3547 Transposase and inactivated derivatives. | 0.520 |
SBI_08579 | SBI_01616 | SBI_08579 | SBI_01616 | Transposase IS4 family protein; COG3666 Transposase and inactivated derivatives. | IS116/IS110/IS902 family transposase; COG3547 Transposase and inactivated derivatives. | 0.436 |
SBI_08579 | SBI_03184 | SBI_08579 | SBI_03184 | Transposase IS4 family protein; COG3666 Transposase and inactivated derivatives. | Hypothetical protein. | 0.549 |
SBI_08579 | SBI_08578 | SBI_08579 | SBI_08578 | Transposase IS4 family protein; COG3666 Transposase and inactivated derivatives. | Integrase catalytic region; COG2801 Transposase and inactivated derivatives. | 0.439 |
SBI_08579 | SBI_08608 | SBI_08579 | SBI_08608 | Transposase IS4 family protein; COG3666 Transposase and inactivated derivatives. | COG3547 Transposase and inactivated derivatives. | 0.516 |
SBI_08579 | SBI_08710 | SBI_08579 | SBI_08710 | Transposase IS4 family protein; COG3666 Transposase and inactivated derivatives. | IS116/IS110/IS902 family transposase; COG3547 Transposase and inactivated derivatives. | 0.436 |
SBI_08579 | SBI_09362 | SBI_08579 | SBI_09362 | Transposase IS4 family protein; COG3666 Transposase and inactivated derivatives. | Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. | 0.584 |
SBI_08579 | SBI_09363 | SBI_08579 | SBI_09363 | Transposase IS4 family protein; COG3666 Transposase and inactivated derivatives. | Putative transcriptional regulator, ArsR family protein; COG0640 Predicted transcriptional regulators. | 0.482 |
SBI_08579 | ozmE | SBI_08579 | SBI_09655 | Transposase IS4 family protein; COG3666 Transposase and inactivated derivatives. | COG0236 Acyl carrier protein. | 0.562 |
SBI_08608 | SBI_08579 | SBI_08608 | SBI_08579 | COG3547 Transposase and inactivated derivatives. | Transposase IS4 family protein; COG3666 Transposase and inactivated derivatives. | 0.516 |
SBI_08608 | SBI_09363 | SBI_08608 | SBI_09363 | COG3547 Transposase and inactivated derivatives. | Putative transcriptional regulator, ArsR family protein; COG0640 Predicted transcriptional regulators. | 0.403 |
SBI_08710 | SBI_08579 | SBI_08710 | SBI_08579 | IS116/IS110/IS902 family transposase; COG3547 Transposase and inactivated derivatives. | Transposase IS4 family protein; COG3666 Transposase and inactivated derivatives. | 0.436 |
SBI_08710 | ozmE | SBI_08710 | SBI_09655 | IS116/IS110/IS902 family transposase; COG3547 Transposase and inactivated derivatives. | COG0236 Acyl carrier protein. | 0.450 |
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