STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBI_09199Endoglucanase; COG3979 Uncharacterized protein contain chitin-binding domain type 3. (798 aa)    
Predicted Functional Partners:
SBI_02187
Esterase, PHB depolymerase family protein; COG3509 Poly(3-hydroxybutyrate) depolymerase.
  
     0.528
SBI_09955
Hypothetical protein.
 
   
 0.517
SBI_09941
Hypothetical protein; COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit.
  
 
   0.515
SBI_02512
Putative cellulase.
 
     0.504
SBI_07346
Hypothetical protein.
  
 
   0.487
celA2
Endo-1,4-beta-glucanase.
 
   0.471
SBI_09198
Hypothetical protein.
       0.459
SBI_06423
Hypothetical protein.
  
     0.447
SBI_06431
Hypothetical protein.
  
     0.437
SBI_03682
Secreted lyase.
 
   0.435
Your Current Organism:
Streptomyces bingchenggensis
NCBI taxonomy Id: 749414
Other names: S. bingchenggensis BCW-1, Streptomyces bingchenggensis BCW-1, Streptomyces bingchenggensis str. BCW-1, Streptomyces bingchenggensis strain BCW-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.