STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBI_09754COG1230 Co/Zn/Cd efflux system component. (337 aa)    
Predicted Functional Partners:
SBI_09756
Integral membrane protein; COG1012 NAD-dependent aldehyde dehydrogenases.
  
 
 0.695
SBI_09755
COG0640 Predicted transcriptional regulators.
     
 0.638
SBI_00236
COG2217 Cation transport ATPase.
  
 0.469
SBI_08945
ATPase, P-type (transporting), HAD superfamily, subfamily IC; COG0474 Cation transport ATPase.
  
 0.469
SBI_05873
Hypothetical protein.
   
    0.441
SBI_05882
Hypothetical protein.
   
    0.441
Your Current Organism:
Streptomyces bingchenggensis
NCBI taxonomy Id: 749414
Other names: S. bingchenggensis BCW-1, Streptomyces bingchenggensis BCW-1, Streptomyces bingchenggensis str. BCW-1, Streptomyces bingchenggensis strain BCW-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.