STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL03991.1McrBC restriction endonuclease system McrB subunit putative. (338 aa)    
Predicted Functional Partners:
GAL03993.1
Hypothetical protein.
 
 0.999
GAL03990.1
McrBC restriction endonuclease system McrB subunit putative.
     0.989
GAL03992.1
Putative endonuclease.
       0.773
GAL06102.1
Type I restriction-modification system specificity subunit S.
 
  
 0.706
GAL03988.1
Type I restriction-modification system specificity subunit S.
 
  
 0.698
GAL03987.1
Type I restriction-modification system specificity subunit S.
 
  
 0.683
GAL03983.1
Type I restriction-modification system restriction subunit R.
 
  
 0.536
GAL06103.1
Type I restriction-modification system restriction subunit R; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.503
GAL03986.1
Type I restriction-modification system DNA-methyltransferase subunit M.
 
   
 0.481
GAL03985.1
Type I restriction-modification system DNA-methyltransferase subunit M.
 
   
 0.476
Your Current Organism:
Photobacterium aphoticum
NCBI taxonomy Id: 754436
Other names: CECT 7614, DSM 25995, KCTC 23057, P. aphoticum, Photobacterium aphoticum Lucena et al. 2011, Photobacterium sp. CECT 7614, Vibrio sp. JCM 19237, strain M46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.