STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY59645.1FAD dependent oxidoreductase; COGs: COG0578 Glycerol-3-phosphate dehydrogenase; InterPro IPR006076; KEGG: plm:Plim_1960 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase. (417 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
 
 0.919
ADY59644.1
COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: plm:Plim_1959 aldo/keto reductase; PFAM: Aldo/keto reductase; SPTR: Oxidoreductase, aldo/keto reductase family protein; PFAM: Aldo/keto reductase family.
 
  
 0.881
ADY61620.1
Hypothetical protein; InterPro IPR001343; KEGG: plm:Plim_0574 hemagluttinin repeat-containing protein; SPTR: Hemagluttinin repeat-containing protein.
  
     0.707
ADY59840.1
KEGG: plm:Plim_3850 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0104).
  
     0.701
ADY62158.1
COGs: COG1261 Flagellar basal body P-ring biosynthesis protein; InterPro IPR013974: IPR017585; KEGG: plm:Plim_2704 flagella basal body P-ring formation protein FlgA; PFAM: SAF domain; SPTR: Flageller protein FlgA; TIGRFAM: Flagella basal body P-ring formation protein FlgA; PFAM: SAF domain; TIGRFAM: flagella basal body P-ring formation protein FlgA.
  
     0.571
ADY61536.1
D-lactate dehydrogenase (cytochrome); COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR006094: IPR004113: IPR004017; KEGG: psl:Psta_2342 D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; Cysteine-rich domain; PRIAM: D-lactate dehydrogenase (cytochrome); SPTR: Putative oxidase; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain.
  
  
 0.569
ADY60214.1
Hypothetical protein; COGs: COG3857 ATP-dependent nuclease subunit B; KEGG: plm:Plim_2361 ATP-dependent nuclease subunit B-like protein; SPTR: ATP-dependent deoxyribonuclease subunit B.
  
     0.546
ADY57697.1
HTTM domain protein; InterPro IPR011020; KEGG: plm:Plim_0154 HTTM domain protein; SMART: HTTM; SPTR: Putative uncharacterized protein; PFAM: Vitamin K-dependent gamma-carboxylase.
  
     0.542
ADY60215.1
Exodeoxyribonuclease V; COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR000212; KEGG: plm:Plim_1377 exodeoxyribonuclease V; PFAM: DNA helicase, UvrD/REP type; PRIAM: Exodeoxyribonuclease V; SPTR: UvrD/REP helicase; PFAM: UvrD/REP helicase; TIGRFAM: recombination helicase AddA, Firmicutes type; Belongs to the helicase family. UvrD subfamily.
 
    0.519
ADY61273.1
COGs: COG1033 exporter of the RND superfamily protein; KEGG: plm:Plim_3300 exporter of the RND superfamily protein-like protein; SPTR: Probable integral membrane protein; PFAM: MMPL family.
  
     0.516
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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