STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY60686.1InterPro IPR011444; KEGG: plm:Plim_1120 protein of unknown function DUF1549; PFAM: Protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553). (799 aa)    
Predicted Functional Partners:
ADY60649.1
COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883: IPR003468: IPR004677; KEGG: rba:RB6350 putative bifunctional cbb3-type cytochrome c oxidase subunit I/II; PFAM: Cytochrome c oxidase, monohaem subunit/FixO; Cytochrome c oxidase, subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Probable cytochrome oxidase subunit (Cbb3-type); TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; Cytochrome c oxidase, monohaem subunit/FixO; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subuni [...]
  
 
 0.948
ADY60687.1
InterPro IPR010869: IPR006311; KEGG: plm:Plim_1121 protein of unknown function DUF1501; PFAM: Protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501).
 
     0.903
ADY62244.1
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.851
ADY62237.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; KEGG: plm:Plim_3983 molybdopterin oxidoreductase, iron-sulfur binding subunit; SPTR: Molybdopterin oxidoreductase, iron-sulfur binding subunit; PFAM: Molydopterin dinucleotide binding domain.
  
 
 0.845
ADY57790.1
Heme-binding protein; InterPro IPR013427; KEGG: psl:Psta_0896 heme-binding protein; SPTR: Probable L-sorbosone dehydrogenase; TIGRFAM: Haem-binding domain, putative; PFAM: Cytochrome c; TIGRFAM: putative heme-binding domain, Pirellula/Verrucomicrobium type.
  
 
   0.783
ADY60956.1
KEGG: psl:Psta_2567 signal peptide and transmembrane prediction; SPTR: Putative uncharacterized protein; PFAM: Trehalose utilisation.
  
     0.763
ADY61506.1
KEGG: dfe:Dfer_3173 signal peptide; SPTR: Putative uncharacterized protein; PFAM: Trehalose utilisation.
  
     0.762
ADY60354.1
InterPro IPR012307; KEGG: plm:Plim_1610 hypothetical protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Putative uncharacterized protein; PFAM: Xylose isomerase-like TIM barrel.
  
     0.753
ADY61924.1
Heme-binding protein; InterPro IPR013427: IPR010496: IPR003088; KEGG: plm:Plim_3308 heme-binding protein; PFAM: Protein of unknown function DUF1080; Cytochrome c, class I; SPTR: Heme-binding protein; TIGRFAM: Haem-binding domain, putative; PFAM: Cytochrome c; Domain of Unknown Function (DUF1080); TIGRFAM: putative heme-binding domain, Pirellula/Verrucomicrobium type.
  
     0.735
ADY62367.1
Heme-binding protein; InterPro IPR000421: IPR003088: IPR013427; KEGG: psl:Psta_1946 heme-binding protein; PFAM: Coagulation factor 5/8 type, C-terminal; Cytochrome c, class I; SPTR: Heme-binding protein; TIGRFAM: Haem-binding domain, putative; PFAM: F5/8 type C domain; Cytochrome c; Trehalose utilisation; TIGRFAM: putative heme-binding domain, Pirellula/Verrucomicrobium type.
  
     0.729
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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