STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL99460.1Putative transcriptional regulator; PFAM: Helix-turn-helix. (115 aa)    
Predicted Functional Partners:
AFL99461.1
PFAM: Protein of unknown function (DUF1538).
  
  
 0.739
AFL99462.1
PFAM: Nitrogen regulatory protein P-II.
       0.718
AFL99378.1
TIGR03084 family protein; PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: TIGR03084 family protein; uncharacterized Actinobacterial protein TIGR03083.
  
     0.679
AFM01941.1
Cell wall-binding protein; PFAM: Putative cell wall binding repeat 2; Cna protein B-type domain; Bacterial Ig-like domain (group 1).
  
     0.524
AFL99439.1
PFAM: Predicted integral membrane protein (DUF2275).
  
     0.490
AFM02151.1
Putative membrane protein; PFAM: Protein of unknown function (DUF445).
  
     0.490
AFM00687.1
PFAM: Domain of unknown function (DUF1836).
  
    0.468
AFM02150.1
Putative membrane protein; PFAM: Protein of unknown function (DUF445).
  
     0.454
AFM00762.1
Hypothetical protein.
  
     0.446
AFM02118.1
Cell wall-binding protein; PFAM: Putative cell wall binding repeat 2.
  
     0.443
Your Current Organism:
Desulfitobacterium dehalogenans
NCBI taxonomy Id: 756499
Other names: D. dehalogenans ATCC 51507, Desulfitobacterium dehalogenans ATCC 51507, Desulfitobacterium dehalogenans DSM 9161, Desulfitobacterium dehalogenans JW/IU-DC1, Desulfitobacterium dehalogenans str. ATCC 51507, Desulfitobacterium dehalogenans strain ATCC 51507
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.