STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM00369.1Hypothetical protein. (387 aa)    
Predicted Functional Partners:
AFM00372.1
Putative ABC-type exoprotein transport system, permease component; PFAM: Bacterial ABC transporter protein EcsB.
 
     0.677
AFM01660.1
PFAM: Acetyltransferase (GNAT) family.
  
     0.559
AFM00370.1
Hypothetical protein.
       0.513
AFM00371.1
Putative transcriptional regulator; PFAM: Helix-turn-helix.
       0.513
AFM02308.1
Hypothetical protein.
  
     0.504
AFL99443.1
Hypothetical protein.
  
     0.478
AFM00373.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
    0.472
AFM00621.1
PFAM: Acetyltransferase (GNAT) family.
  
     0.468
AFM01022.1
Putative metal-dependent membrane protease; PFAM: CAAX amino terminal protease family.
  
     0.444
AFM01035.1
PFAM: Protein of unknown function (DUF2628).
  
     0.441
Your Current Organism:
Desulfitobacterium dehalogenans
NCBI taxonomy Id: 756499
Other names: D. dehalogenans ATCC 51507, Desulfitobacterium dehalogenans ATCC 51507, Desulfitobacterium dehalogenans DSM 9161, Desulfitobacterium dehalogenans JW/IU-DC1, Desulfitobacterium dehalogenans str. ATCC 51507, Desulfitobacterium dehalogenans strain ATCC 51507
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.