STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106151425Uncharacterized protein LOC106151425; Belongs to the iron/ascorbate-dependent oxidoreductase family. (340 aa)    
Predicted Functional Partners:
LOC106168599
Uncharacterized protein LOC106168599.
    
 0.551
LOC106152211
UPF0676 protein C1494.01-like.
  
     0.536
LOC106151218
UPF0676 protein C1494.01 isoform X1; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.535
LOC106173182
UPF0676 protein C1494.01-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.535
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.