STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106151722Chitinase domain-containing protein 1-like. (221 aa)    
Predicted Functional Partners:
LOC106160820
WD repeat-containing protein 90-like.
    
 
 0.658
LOC106160821
WD repeat-containing protein 90-like.
    
 
 0.658
LOC106155246
UDP-xylose and UDP-N-acetylglucosamine transporter isoform X2.
      
 0.634
LOC106153336
Mitochondrial import inner membrane translocase subunit Tim21.
      
 0.628
LOC106173491
Enkurin-like.
    
 
 0.608
LOC106152066
Prosaposin-like.
     
 0.604
LOC106152701
Prosaposin.
     
 0.604
LOC106160172
Prosaposin isoform X1.
     
 0.604
LOC106167876
Serine/arginine repetitive matrix protein 1 isoform X1.
     
 0.604
LOC106154840
Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family.
   
    0.563
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.