STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106152570Armadillo repeat-containing protein 3 isoform X1. (891 aa)    
Predicted Functional Partners:
LOC106162065
EF-hand calcium-binding domain-containing protein 1.
   
 
 0.815
LOC106157334
UPF0691 protein C9orf116 homolog isoform X1.
   
 
 0.800
LOC106174590
RIB43A-like with coiled-coils protein 2.
   
 
 0.753
LOC106156480
IQ and ubiquitin-like domain-containing protein.
   
 
 0.696
LOC106181400
Uncharacterized protein C5orf49 homolog.
   
  
 0.666
LOC106155205
Coiled-coil domain-containing protein 96.
   
  
 0.636
LOC106153508
Coiled-coil domain-containing protein 189-like.
      
 0.633
LOC106156065
UPF0602 protein C4orf47 homolog isoform X2.
   
  
 0.633
LOC106156063
UPF0602 protein C4orf47 homolog.
   
  
 0.633
LOC106171087
Coiled-coil domain-containing protein 170.
      
 0.628
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.