STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106154756BRISC complex subunit Abraxas 2. (509 aa)    
Predicted Functional Partners:
LOC106165031
BRISC and BRCA1-A complex member 1.
    
 0.991
LOC106177171
Lys-63-specific deubiquitinase BRCC36.
    
 0.991
LOC106180822
BRISC and BRCA1-A complex member 2 isoform X1.
    
 0.991
LOC106152198
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 
 0.699
LOC106155097
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 
 0.699
LOC106173053
Uncharacterized protein LOC106173053.
   
 0.553
LOC106167780
Mitochondrial ribosome-associated GTPase 2.
    
 
 0.543
LOC106160887
Cytochrome b5 domain-containing protein 1; Belongs to the cytochrome b5 family.
      
 0.512
LOC106169660
DPH4 homolog.
    
 
 0.497
LOC106157345
Ubiquitin carboxyl-terminal hydrolase 7; Belongs to the peptidase C19 family.
    
 
 0.439
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.