STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106155634Serine/arginine repetitive matrix protein 1. (781 aa)    
Predicted Functional Partners:
LOC106157049
Metastasis-associated protein MTA3.
   
 0.966
LOC106168799
Histone-binding protein RBBP7-like.
    
 0.841
LOC106177283
Histone-binding protein RBBP7 isoform X1.
    
 0.841
LOC106170299
Protein NYNRIN-like.
    
 0.799
LOC106153961
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.727
LOC106160064
Uncharacterized protein LOC106160064.
    
 0.727
LOC106168509
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.727
LOC106169904
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.727
LOC106174945
Cyclin-dependent kinase 2-associated protein 1.
   
 
 0.712
LOC106155073
Transcriptional repressor p66-alpha.
    
 0.711
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.