STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106158801Histone-lysine N-methyltransferase KMT5B-A-like. (602 aa)    
Predicted Functional Partners:
LOC106155691
Calmodulin-lysine N-methyltransferase isoform X1.
     
 0.904
LOC106177733
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
   
 0.831
LOC106152150
Uncharacterized protein LOC106152150.
   
  
 0.602
LOC106173811
N-lysine methyltransferase KMT5A-A.
      
 0.576
LOC106154598
Histone-lysine N-methyltransferase SETD1B.
      
 0.574
LOC106160089
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
      
 0.567
LOC106179131
E3 ubiquitin-protein ligase TRIP12 isoform X1.
   
  
 0.562
LOC106179840
E3 ubiquitin-protein ligase TRIP12-like.
   
  
 0.562
LOC106158443
Histone-lysine N-methyltransferase ASH1L isoform X1.
   
  
 0.535
LOC106161653
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
   
  
 0.520
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.