STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106159266Ubiquitin carboxyl-terminal hydrolase. (446 aa)    
Predicted Functional Partners:
LOC106161875
Ubiquitin carboxyl-terminal hydrolase 47-like.
 
 
  
 0.853
LOC106152458
ubiquitin-40S ribosomal protein S27a.
   
 0.834
LOC106153570
UV-stimulated scaffold protein A.
    
 0.796
LOC106157618
Uncharacterized protein LOC106157618 isoform X1.
    
 0.776
LOC106179131
E3 ubiquitin-protein ligase TRIP12 isoform X1.
   
 
 0.705
LOC106179840
E3 ubiquitin-protein ligase TRIP12-like.
   
 
 0.705
LOC106166632
DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
   
 
 0.692
LOC106157391
GMP synthase [glutamine-hydrolyzing]-like.
   
 
 0.652
LOC106169407
GMP synthase [glutamine-hydrolyzing].
   
 
 0.652
LOC106158739
Uncharacterized protein LOC106158739 isoform X1.
   
 0.620
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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