STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106160619AP-5 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (488 aa)    
Predicted Functional Partners:
LOC106165625
cyclin-G-associated kinase.
   
 0.966
LOC106153707
AP complex subunit beta.
    
 0.757
LOC106155499
AP complex subunit beta; Belongs to the adaptor complexes large subunit family.
    
 0.757
LOC106180020
AP-4 complex subunit epsilon-1.
   
 0.703
LOC106181453
AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.
   
 0.703
LOC106150848
AP-1 complex subunit gamma.
   
 0.693
LOC106160166
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.670
LOC106171685
FAST kinase domain-containing protein 4-like.
    
 0.670
LOC106173305
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.670
LOC106175121
FAST kinase domain-containing protein 4.
    
 0.670
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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