STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106162745Methyltransferase-like protein 27. (209 aa)    
Predicted Functional Partners:
LOC106179586
Bystin.
   
 0.648
LOC106151786
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.602
LOC106152466
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.601
LOC106181854
Protein LTV1 homolog isoform X1.
   
 0.597
LOC106157676
Multifunctional methyltransferase subunit TRM112-like protein.
   
 0.572
LOC106174231
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 0.530
LOC106174584
pre-rRNA-processing protein TSR1 homolog.
   
 0.529
LOC106181707
pre-rRNA-processing protein TSR1 homolog isoform X1.
   
 0.529
LOC106151219
Serine/threonine-protein kinase RIO2.
   
 
 0.511
LOC106151024
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
  0.502
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.