STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106162976Vesicle transport protein SEC20-like. (241 aa)    
Predicted Functional Partners:
LOC106151211
Vesicle transport protein USE1.
    
 0.942
LOC106154620
Vesicle-trafficking protein SEC22b-like isoform X1; Belongs to the synaptobrevin family.
    
 0.936
LOC106160793
Syntaxin-18 isoform X1.
    
 0.932
LOC106176352
Vesicle transport protein SEC20.
  
  
 
0.900
LOC106171050
Alpha-soluble NSF attachment protein isoform X1.
    
  0.558
LOC106179612
Vesicle-fusing ATPase.
    
  0.548
LOC106163316
Centromere/kinetochore protein zw10 homolog.
     
 0.539
LOC106174027
Gamma-soluble NSF attachment protein-like.
    
  0.481
LOC106154092
Gamma-soluble NSF attachment protein.
    
  0.481
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.