STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106165838pre-mRNA 3'-end-processing factor FIP1 isoform X1. (516 aa)    
Predicted Functional Partners:
LOC106154802
Cleavage and polyadenylation specificity factor subunit 4.
    
 0.999
LOC106154849
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.998
LOC106169923
Cleavage and polyadenylation specificity factor subunit 3.
    
 0.998
LOC106173820
Cleavage and polyadenylation specificity factor subunit 1-like.
   
 0.998
LOC106167180
poly(A) polymerase type 3.
   
 0.997
LOC106178168
Cleavage stimulation factor subunit 3 isoform X1.
   
 0.997
LOC106181495
Symplekin.
   
 0.997
LOC106161218
pre-mRNA 3' end processing protein WDR33-like.
   
 0.996
LOC106177714
pre-mRNA 3' end processing protein WDR33.
   
 0.996
LOC106151330
WD repeat-containing protein 82.
   
 0.995
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.