LOC106167305 protein (Lingula anatina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC106167305

arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2-like. (746 aa)

Predicted Functional Partners:

LOC106171017

0.942

LOC106170712

0.679

LOC106159168

0.611

LOC106163145

0.611

LOC106172791

0.611

LOC106156681

0.607

LOC106163482

0.607

LOC106169597

0.597

LOC106159858

0.565

LOC106169064

0.556

Your Current Organism:

Lingula anatina

NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106156681	LOC106159858	A0A1S3HN93	A0A1S3I353	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.986
LOC106156681	LOC106167305	A0A1S3HN93	A0A1S3ITU4	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2-like.	0.607
LOC106156681	LOC106169064	A0A1S3HN93	A0A1S3J035	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.	0.975
LOC106156681	LOC106169597	A0A1S3HN93	A0A1S3J2C1	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component 5.	0.986
LOC106156681	LOC106170712	A0A1S3HN93	A0A1S3J7B9	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Ras-related protein Rab-11A.	0.823
LOC106156681	LOC106171017	A0A1S3HN93	A0A1S3J835	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2-like.	0.607
LOC106159168	LOC106159858	A0A1S3I0F4	A0A1S3I353	DCC-interacting protein 13-alpha-like.	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.452
LOC106159168	LOC106163145	A0A1S3I0F4	A0A1S3IE31	DCC-interacting protein 13-alpha-like.	DCC-interacting protein 13-alpha-like.	0.988
LOC106159168	LOC106167305	A0A1S3I0F4	A0A1S3ITU4	DCC-interacting protein 13-alpha-like.	arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2-like.	0.611
LOC106159168	LOC106169597	A0A1S3I0F4	A0A1S3J2C1	DCC-interacting protein 13-alpha-like.	Exocyst complex component 5.	0.517
LOC106159168	LOC106170712	A0A1S3I0F4	A0A1S3J7B9	DCC-interacting protein 13-alpha-like.	Ras-related protein Rab-11A.	0.667
LOC106159168	LOC106171017	A0A1S3I0F4	A0A1S3J835	DCC-interacting protein 13-alpha-like.	arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2-like.	0.611
LOC106159168	LOC106172791	A0A1S3I0F4	A0A1S3JFF8	DCC-interacting protein 13-alpha-like.	DCC-interacting protein 13-alpha-like.	0.988
LOC106159858	LOC106156681	A0A1S3I353	A0A1S3HN93	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.986
LOC106159858	LOC106159168	A0A1S3I353	A0A1S3I0F4	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	DCC-interacting protein 13-alpha-like.	0.452
LOC106159858	LOC106163145	A0A1S3I353	A0A1S3IE31	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	DCC-interacting protein 13-alpha-like.	0.452
LOC106159858	LOC106163482	A0A1S3I353	A0A1S3IE79	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.986
LOC106159858	LOC106167305	A0A1S3I353	A0A1S3ITU4	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2-like.	0.565
LOC106159858	LOC106169064	A0A1S3I353	A0A1S3J035	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.	0.996
LOC106159858	LOC106169597	A0A1S3I353	A0A1S3J2C1	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component 5.	0.998