STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106170534Dachshund homolog 2. (845 aa)    
Predicted Functional Partners:
LOC106179425
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
    
 
 0.842
LOC106179558
Homeobox protein SIX6.
    
 
 0.645
LOC106181030
Transmembrane 7 superfamily member 3.
      
 0.538
LOC106153769
Homeobox protein six1.
    
 
 0.531
LOC106176673
Homeobox protein six1a.
    
 
 0.531
LOC112041598
Ras-related protein Rab-28-like.
   
  
 0.516
LOC106162000
Homeobox protein Dlx1a isoform X1.
      
 0.503
LOC106158443
Histone-lysine N-methyltransferase ASH1L isoform X1.
      
 0.487
LOC106169803
One cut domain family member.
      
 0.487
LOC106173155
Paired box protein Pax-6 isoform X1.
    
 
 0.416
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.