STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106171624Histidine ammonia-lyase; Belongs to the PAL/histidase family. (660 aa)    
Predicted Functional Partners:
LOC106169484
Urocanate hydratase-like.
 
 
 0.978
LOC106172207
Urocanate hydratase.
 
 
 0.978
LOC106176476
Cytosolic non-specific dipeptidase.
    
 0.921
LOC106167343
Histidine decarboxylase-like.
     
 0.905
LOC106152793
Probable imidazolonepropionase isoform X1.
 
 
 0.794
LOC106180313
Probable imidazolonepropionase.
 
 
 0.794
LOC106175096
Formimidoyltransferase-cyclodeaminase.
  
  
 0.692
LOC106167048
Guanidinobutyrase isoform X1; Belongs to the arginase family.
  
 
 0.615
LOC106181519
Arginase.
  
 
 0.615
LOC106182048
Agmatinase, mitochondrial; Belongs to the arginase family.
  
 
 0.615
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.