STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106174048Regulator of chromosome condensation. (413 aa)    
Predicted Functional Partners:
LOC106160330
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.975
LOC106168429
Ran GTPase-activating protein 1 isoform X1.
   
 
 0.862
LOC106169012
Ran-specific GTPase-activating protein.
   
 0.805
LOC106179731
Ran-binding protein 3-like isoform X1.
    
 
 0.776
LOC106167715
Importin subunit beta-1-like.
    
 
 0.680
LOC106170853
E3 SUMO-protein ligase RanBP2.
   
 0.668
LOC106177627
RANBP2-like and GRIP domain-containing protein 5/6.
   
 0.668
LOC106177733
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
   
  0.665
LOC106175839
Phosphodiesterase delta-like protein; Belongs to the PDE6D/unc-119 family.
    
 
 0.634
LOC106160283
Importin subunit alpha-3-like.
   
 
 0.605
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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