STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106176557Fibropellin-1-like isoform X1. (1283 aa)    
Predicted Functional Partners:
LOC106170853
E3 SUMO-protein ligase RanBP2.
   
 0.983
LOC106177627
RANBP2-like and GRIP domain-containing protein 5/6.
   
 0.983
LOC106172199
DNA ligase 1-like.
   
 0.958
LOC106167715
Importin subunit beta-1-like.
   
 0.842
LOC106168429
Ran GTPase-activating protein 1 isoform X1.
   
 0.751
LOC106181866
Ran GTPase-activating protein 1-like.
   
 0.751
LOC106173085
Transportin-1 isoform X1.
   
 0.691
LOC106163082
Nuclear pore complex protein Nup50.
   
 0.654
LOC106169012
Ran-specific GTPase-activating protein.
   
 0.647
LOC106179126
Golgin subfamily A member 4.
   
 0.647
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.