STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106180647Enhancer of mRNA-decapping protein 3-like. (512 aa)    
Predicted Functional Partners:
LOC106161998
ATP-dependent RNA helicase cgh-1; Belongs to the DEAD box helicase family.
   
 0.988
LOC106168554
m7GpppN-mRNA hydrolase.
  
 0.976
LOC106176731
mRNA-decapping enzyme 1B.
   
 0.975
LOC106176193
Protein PAT1 homolog 1.
    
 0.965
LOC106180645
Enhancer of mRNA-decapping protein 3.
  
  
 
0.900
LOC106150882
Enhancer of mRNA-decapping protein 4 isoform X1.
   
 0.892
LOC106181401
Enhancer of mRNA-decapping protein 4-like.
   
 0.892
LOC106159801
mRNA-decapping enzyme 1B-like.
   
 0.882
LOC106151197
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.872
LOC106173995
Protein LSM14 homolog B isoform X1.
    
 
 0.863
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.