STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106181391Synaptic vesicle membrane protein VAT-1 homolog. (513 aa)    
Predicted Functional Partners:
LOC106168599
Uncharacterized protein LOC106168599.
  
 0.537
LOC106176212
Quinone oxidoreductase-like protein 1 isoform X1.
  
  
 0.519
LOC106160544
Fatty acid 2-hydroxylase; Catalyzes stereospecific hydroxylation of free fatty acids at the C-2 position to produce (R)-2-hydroxy fatty acids, which are building blocks of sphingolipids and glycosphingolipids common in neural tissue and epidermis. Plays an essential role in the synthesis of galactosphingolipids of the myelin sheath. Responsible for the synthesis of sphingolipids and glycosphingolipids involved in the formation of epidermal lamellar bodies critical for skin permeability barrier. Participates in the synthesis of glycosphingolipids and a fraction of type II wax diesters i [...]
   
  
 0.492
LOC106150859
Hydroxysteroid dehydrogenase-like protein 2 isoform X1.
  
 0.443
LOC106163552
Hydroxysteroid dehydrogenase-like protein 2.
  
 0.443
LOC106176951
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.418
LOC106153891
Enoyl-[acyl-carrier-protein] reductase, mitochondrial-like.
  
   
0.405
LOC106152140
Malate synthase, glyoxysomal-like isoform X2.
   
  
 0.404
LOC106167891
Uncharacterized protein LOC106167891.
   
  
 0.404
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.