STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106181878Vacuolar protein sorting-associated protein VTA1 homolog. (311 aa)    
Predicted Functional Partners:
LOC106159156
Charged multivesicular body protein 1b-2-like.
    
 0.999
LOC106175815
Charged multivesicular body protein 5.
   
 0.998
LOC106159926
Charged multivesicular body protein 1a-like.
    
 0.996
LOC106155011
Vacuolar protein sorting-associated protein 4B-like isoform X2; Belongs to the AAA ATPase family.
   
 0.987
LOC106155921
Vacuolar protein sorting-associated protein 4B-like; Belongs to the AAA ATPase family.
   
 0.987
LOC106167131
Vacuolar protein sorting-associated protein 4A-like; Belongs to the AAA ATPase family.
   
 0.987
LOC106169736
Vacuolar protein sorting-associated protein 4A isoform X1; Belongs to the AAA ATPase family.
   
 0.987
LOC106169755
Vacuolar protein sorting-associated protein 4A isoform X1; Belongs to the AAA ATPase family.
   
 0.987
LOC106169754
Vacuolar protein sorting-associated protein 4A isoform X1; Belongs to the AAA ATPase family.
   
 0.987
LOC106152094
IST1 homolog.
   
 
 0.950
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.