STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliCFlagellin protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (362 aa)    
Predicted Functional Partners:
fliS
Flagellin-specific chaperone FliS protein.
 
 
 0.999
flgL
Flagellar hook-filament junction protein, N-terminus flagellin protein.
 
  
 0.985
flgK
Flagellar hook-associated FlgK protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.979
fliG
Flagellar motor switch FliG protein.
 
  
 0.976
flgB
Flagellar basal-body rod FlgB protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.972
fliD
Flagellar hook-associated 2 protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
 
 0.966
fliD-2
Flagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
 
 0.966
flgC
Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.965
fliM
Flagellar motor switch FliM protein.
 
  
 0.965
flgG
Involved in flagellar biosynthesis, distal rod protein; Belongs to the flagella basal body rod proteins family.
 
 
 0.963
Your Current Organism:
Herbaspirillum seropedicae
NCBI taxonomy Id: 757424
Other names: H. seropedicae SmR1, Herbaspirillum seropedicae SmR1, Herbaspirillum seropedicae str. SmR1, Herbaspirillum seropedicae strain SmR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.