STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADJ63794.1ABC-type sugar transport system, permease component protein; Belongs to the binding-protein-dependent transport system permease family. (328 aa)    
Predicted Functional Partners:
ADJ63793.1
ABC-type sugar transport system, ATPase component protein.
 0.987
rbsA
ABC-type sugar transport system, ATPase component protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.967
rbsA-2
ABC-type sugar transport system, ATPase component protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.967
rbsA-3
ABC-type sugar transport system, ATPase component protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.964
ADJ65494.1
ABC-type sugar transport system, ATPase component protein.
 0.948
rbsD-2
ABC-type sugar transport system, auxiliary component protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.929
ADJ63792.1
ABC-type sugar transport system, periplasmic component protein.
 
 0.920
ADJ62579.1
ABC-type sugar transport system, periplasmic component protein.
 
 0.853
ADJ62568.1
ABC-type sugar transport system, periplasmic component protein.
 
 0.848
ADJ63795.1
Transcription regulator DNA-binding repressor protein.
 
  
 0.843
Your Current Organism:
Herbaspirillum seropedicae
NCBI taxonomy Id: 757424
Other names: H. seropedicae SmR1, Herbaspirillum seropedicae SmR1, Herbaspirillum seropedicae str. SmR1, Herbaspirillum seropedicae strain SmR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.