STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADJ63825.1Trehalose synthase protein. (1168 aa)    
Predicted Functional Partners:
glgB-2
1,4-alpha-glucan branching enzyme protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 
 0.997
glgX
Glycogen debranching enzyme protein; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.997
treZ
Malto-oligosyltrehalose trehalohydrolase protein.
 
 
 0.994
glgE
Alpha-amylase protein; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
 
 
 0.993
treY
Malto-oligosyl trehalose synthase protein.
 
 
 0.992
malQ
4-alpha-glucanotransferase protein.
 
 
 0.991
glgB
1,4-alpha-glucan branching enzyme protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 
 0.985
otsB
Trehalose-6-phosphate phophatase, biosynthetic, protein; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
 0.984
glgA
Glycogen synthase protein; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
  
  
 0.968
ADJ65578.1
Glucosidase protein; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.934
Your Current Organism:
Herbaspirillum seropedicae
NCBI taxonomy Id: 757424
Other names: H. seropedicae SmR1, Herbaspirillum seropedicae SmR1, Herbaspirillum seropedicae str. SmR1, Herbaspirillum seropedicae strain SmR1
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