STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADJ64875.1ABC-type sugar transport system, permease component protein. (292 aa)    
Predicted Functional Partners:
ADJ64874.1
ABC-type sugar transport system, periplasmic component protein.
 
 0.993
ADJ64876.1
ABC-type sugar transport system, permease component protein.
 
 
 0.976
ADJ64878.1
ABC-type sugar transport system, ATPase component protein; Belongs to the ABC transporter superfamily.
 
 
 0.975
ADJ64818.1
ABC-type sugar transport systems, ATPase component protein; Belongs to the ABC transporter superfamily.
 
 
 0.905
upgC
ABC-type sn-glycerol-3-phosphate transport system, ATPase component protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
 
 0.904
ADJ61800.1
ABC-type maltose/maltodextrin transport system, ATPase component protein; Belongs to the ABC transporter superfamily.
 
 
 0.902
ADJ66019.1
ABC-type sugar transport system, ATPase component protein; Belongs to the ABC transporter superfamily.
 
 
 0.902
ADJ61969.1
ABC-type sugar transport system, ATPase component protein; Belongs to the ABC transporter superfamily.
 
 
 0.901
ADJ66018.1
ABC-type sugar transport system, permease component protein.
 
 0.899
ADJ61796.1
ABC-type sugar transport system, permease component protein.
 
 0.898
Your Current Organism:
Herbaspirillum seropedicae
NCBI taxonomy Id: 757424
Other names: H. seropedicae SmR1, Herbaspirillum seropedicae SmR1, Herbaspirillum seropedicae str. SmR1, Herbaspirillum seropedicae strain SmR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.