STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
idhIsocitrate dehydrogenase. (419 aa)    
Predicted Functional Partners:
ADK30375.1
Aconitase.
 
 0.996
gltA
Putative citrate synthase; Belongs to the citrate synthase family.
 
 
 0.995
ADK31505.1
Ferredoxin.
   
 
 0.940
ldh-2
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
  
 
 0.921
porA6
2-ketoisovalerate ferredoxin reductase.
   
 
 0.914
ADK31507.1
Thiamine pyrophosphate protein domain protein TPP-binding protein.
     
 0.913
porA
Pyruvate ferredoxin/flavodoxin oxidoreductase.
     
 0.910
gdh
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.907
aspC
Aspartate aminotransferase.
   
 0.841
purB
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
 0.826
Your Current Organism:
Brachyspira pilosicoli
NCBI taxonomy Id: 759914
Other names: B. pilosicoli 95/1000, Brachyspira pilosicoli 95/1000
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