Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADK30149.1 | ADK30523.1 | BP951000_0140 | BP951000_0520 | Lytic transglycosylase, catalytic domain protein. | Membrane-bound lytic murein transglycosylase D precursor. | 0.582 |
ADK30149.1 | ADK31072.1 | BP951000_0140 | BP951000_1082 | Lytic transglycosylase, catalytic domain protein. | Penicillin-binding protein, 1A family. | 0.522 |
ADK30149.1 | lepB-2 | BP951000_0140 | BP951000_1658 | Lytic transglycosylase, catalytic domain protein. | Leader peptidase/signal peptidase I; Belongs to the peptidase S26 family. | 0.514 |
ADK30149.1 | ompA-2 | BP951000_0140 | BP951000_0746 | Lytic transglycosylase, catalytic domain protein. | Outer membrane protein, peptidoglycan-associated lipoprotein. | 0.438 |
ADK30420.1 | ADK30523.1 | BP951000_0417 | BP951000_0520 | Hypothetical protein. | Membrane-bound lytic murein transglycosylase D precursor. | 0.621 |
ADK30420.1 | ompA-2 | BP951000_0417 | BP951000_0746 | Hypothetical protein. | Outer membrane protein, peptidoglycan-associated lipoprotein. | 0.461 |
ADK30420.1 | ompA-3 | BP951000_0417 | BP951000_0747 | Hypothetical protein. | Outer membrane protein, peptidoglycan-associated lipoprotein. | 0.415 |
ADK30523.1 | ADK30149.1 | BP951000_0520 | BP951000_0140 | Membrane-bound lytic murein transglycosylase D precursor. | Lytic transglycosylase, catalytic domain protein. | 0.582 |
ADK30523.1 | ADK30420.1 | BP951000_0520 | BP951000_0417 | Membrane-bound lytic murein transglycosylase D precursor. | Hypothetical protein. | 0.621 |
ADK30523.1 | ADK31072.1 | BP951000_0520 | BP951000_1082 | Membrane-bound lytic murein transglycosylase D precursor. | Penicillin-binding protein, 1A family. | 0.571 |
ADK30523.1 | amiB-4 | BP951000_0520 | BP951000_2027 | Membrane-bound lytic murein transglycosylase D precursor. | N-acetylmuramoyl-L-alanine amidase. | 0.575 |
ADK30523.1 | ftsA | BP951000_0520 | BP951000_0661 | Membrane-bound lytic murein transglycosylase D precursor. | Actin like ATPase involved in cell division; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.558 |
ADK30523.1 | lepB-2 | BP951000_0520 | BP951000_1658 | Membrane-bound lytic murein transglycosylase D precursor. | Leader peptidase/signal peptidase I; Belongs to the peptidase S26 family. | 0.706 |
ADK30523.1 | ompA-2 | BP951000_0520 | BP951000_0746 | Membrane-bound lytic murein transglycosylase D precursor. | Outer membrane protein, peptidoglycan-associated lipoprotein. | 0.699 |
ADK30523.1 | ompA-3 | BP951000_0520 | BP951000_0747 | Membrane-bound lytic murein transglycosylase D precursor. | Outer membrane protein, peptidoglycan-associated lipoprotein. | 0.732 |
ADK30523.1 | pbp1 | BP951000_0520 | BP951000_1747 | Membrane-bound lytic murein transglycosylase D precursor. | Transpeptidase involved in peptidoglycan synthesis penicillin binding protein 2. | 0.618 |
ADK30523.1 | purL | BP951000_0520 | BP951000_1144 | Membrane-bound lytic murein transglycosylase D precursor. | Phosphoribosylformylglycinamidine synthase. | 0.704 |
ADK31072.1 | ADK30149.1 | BP951000_1082 | BP951000_0140 | Penicillin-binding protein, 1A family. | Lytic transglycosylase, catalytic domain protein. | 0.522 |
ADK31072.1 | ADK30523.1 | BP951000_1082 | BP951000_0520 | Penicillin-binding protein, 1A family. | Membrane-bound lytic murein transglycosylase D precursor. | 0.571 |
ADK31072.1 | amiB-4 | BP951000_1082 | BP951000_2027 | Penicillin-binding protein, 1A family. | N-acetylmuramoyl-L-alanine amidase. | 0.493 |
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