STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK30523.1Membrane-bound lytic murein transglycosylase D precursor. (466 aa)    
Predicted Functional Partners:
ompA-3
Outer membrane protein, peptidoglycan-associated lipoprotein.
 
 
 
 0.732
lepB-2
Leader peptidase/signal peptidase I; Belongs to the peptidase S26 family.
  
  
 0.706
purL
Phosphoribosylformylglycinamidine synthase.
     
 0.704
ompA-2
Outer membrane protein, peptidoglycan-associated lipoprotein.
 
 
 
 0.699
ADK30420.1
Hypothetical protein.
  
 
 0.621
pbp1
Transpeptidase involved in peptidoglycan synthesis penicillin binding protein 2.
 
 
 0.618
ADK30149.1
Lytic transglycosylase, catalytic domain protein.
 
  
0.582
amiB-4
N-acetylmuramoyl-L-alanine amidase.
 
  
 0.575
ADK31072.1
Penicillin-binding protein, 1A family.
 
  
 0.571
ftsA
Actin like ATPase involved in cell division; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
 
  
 0.558
Your Current Organism:
Brachyspira pilosicoli
NCBI taxonomy Id: 759914
Other names: B. pilosicoli 95/1000, Brachyspira pilosicoli 95/1000
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