STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG15003.1PFAM: Radical SAM; KEGG: pth:PTH_1400 organic radical activating enzymes. (246 aa)    
Predicted Functional Partners:
AEG15005.1
KEGG: dau:Daud_1236 ExsB protein; TIGRFAM: Exoenzyme S synthesis protein B/queuosine synthesis; PFAM: Queuosine synthesis-like.
 
 
 0.999
AEG15006.1
Queuosine biosynthesis protein QueD; KEGG: drm:Dred_1754 putative 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase-related.
 
 
 0.999
folE
PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; TIGRFAM: GTP cyclohydrolase I; HAMAP: GTP cyclohydrolase I; KEGG: chy:CHY_0955 GTP cyclohydrolase I.
  
  
 0.945
AEG15004.1
PFAM: Protein of unknown function DUF366; KEGG: pth:PTH_1401 hypothetical protein.
 
     0.918
AEG14756.1
TIGRFAM: Ribonucleoside-triphosphate reductase, anaerobic; KEGG: pth:PTH_1842 anaerobic ribonucleoside triphosphate reductase; PFAM: ATP-cone.
  
 
 0.792
AEG15000.1
TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase; HAMAP: Multifunctional protein surE; KEGG: pth:PTH_1397 stationary phase survival protein SurE; PFAM: Survival protein SurE-like phosphatase/nucleotidase.
 
     0.759
AEG15001.1
KEGG: tjr:TherJR_1930 hypothetical protein.
       0.708
AEG13996.1
PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; KEGG: pth:PTH_0788 benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit.
 
    0.651
AEG15434.1
CBS domain containing protein; KEGG: drm:Dred_1131 polynucleotide adenylyltransferase region; PFAM: Cystathionine beta-synthase, core; Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; Polynucleotide adenylyltransferase region; SMART: Cystathionine beta-synthase, core.
 
     0.598
AEG15282.1
PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; tRNA methyl transferase-like; TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; HAMAP: GMP synthase [glutamine-hydrolyzing]; KEGG: pth:PTH_2551 GMP synthase.
     
 0.490
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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