STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG15479.1PFAM: Glycosyl transferase, family 2; KEGG: drm:Dred_1090 glycosyl transferase family protein. (226 aa)    
Predicted Functional Partners:
AEG15478.1
KEGG: dae:Dtox_2045 hypothetical protein.
 
  
 0.960
AEG15480.1
KEGG: drm:Dred_1089 hypothetical protein.
 
     0.958
AEG15481.1
PFAM: Thiamin pyrophosphokinase, catalytic domain; KEGG: dae:Dtox_2042 thiamin pyrophosphokinase catalytic region.
 
     0.942
AEG15471.1
KEGG: drm:Dred_1093 hypothetical protein.
 
     0.886
AEG15137.1
KEGG: drm:Dred_2201 hypothetical protein.
     0.782
AEG15477.1
KEGG: dau:Daud_1610 hypothetical protein.
       0.574
AEG15138.1
PFAM: Glycosyl transferase, group 1; KEGG: drm:Dred_2202 glycosyl transferase, group 1.
 
  
 0.547
AEG15649.1
TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase, WbaP; Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: toc:Toce_0501 undecaprenyl-phosphate galactose phosphotransferase, WbaP; PFAM: Bacterial sugar transferase; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase.
  
  
 0.533
AEG15318.1
PFAM: Lipopolysaccharide biosynthesis; KEGG: mtp:Mthe_0945 lipopolysaccharide biosynthesis.
 
  
 0.530
AEG16501.1
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: drm:Dred_2799 endonuclease/exonuclease/phosphatase.
  
   
 0.512
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.