STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG15535.1KEGG: adg:Adeg_1718 type IV pilus assembly protein PilM; manually curated; TIGRFAM: Type IV pilus assembly protein PilM. (371 aa)    
Predicted Functional Partners:
AEG15534.1
PFAM: Fimbrial assembly; KEGG: adg:Adeg_1717 fimbrial assembly family protein.
  
 
 0.994
AEG15533.1
KEGG: adg:Adeg_1716 hypothetical protein.
  
 
 0.972
AEG15541.1
PFAM: Type II secretion system F domain; KEGG: adg:Adeg_1723 type II secretion system F domain protein.
 
 
 
 0.969
AEG15543.1
General secretory pathway protein E; TIGRFAM: Type II secretion system gspE; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; KEGG: adg:Adeg_1725 general secretory pathway protein E; SMART: ATPase, AAA+ type, core.
 
 
 0.967
AEG15542.1
Twitching motility protein; TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: adg:Adeg_1724 twitching motility protein; SMART: ATPase, AAA+ type, core.
 
   
 0.865
AEG15536.1
KEGG: toc:Toce_1923 hypothetical protein.
     
 0.849
AEG15545.1
KEGG: dae:Dtox_3768 peptidase A24A domain protein; PFAM: Peptidase A24A, N-terminal; Peptidase A24A, prepilin type IV.
 
  
 0.828
AEG15537.1
KEGG: adg:Adeg_1720 hypothetical protein.
     
 0.816
AEG15540.1
Hypothetical protein; KEGG: adg:Adeg_1722 type 4 fimbrial biogenesis protein PilE.
 
  
 0.601
AEG15532.1
KEGG: dae:Dtox_2705 hypothetical protein.
  
  
 0.591
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.