STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG16958.1Phenylacetate--CoA ligase; KEGG: pth:PTH_2847 coenzyme F390 synthetase; PFAM: AMP-dependent synthetase/ligase. (434 aa)    
Predicted Functional Partners:
AEG13871.1
KEGG: mta:Moth_0402 phenylacetic acid degradation protein PaaD; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily.
 
 
 0.970
AEG16366.1
Phenylacetate--CoA ligase; KEGG: pth:PTH_1662 coenzyme F390 synthetase; PFAM: AMP-dependent synthetase/ligase.
  
  
 
0.906
AEG16499.1
Phenylacetate--CoA ligase; KEGG: pth:PTH_0472 coenzyme F390 synthetase; PFAM: AMP-dependent synthetase/ligase.
  
  
 
0.902
AEG16959.1
SSS sodium solute transporter superfamily; KEGG: pth:PTH_2848 Na+/panthothenate symporter; TIGRFAM: Sodium/solute symporter, subgroup; PFAM: Sodium/solute symporter.
 
   
 0.817
AEG16498.1
PFAM: Amino acid-binding ACT; KEGG: pth:PTH_2653 ACT domain-containing protein.
 
   0.766
AEG14856.1
Acetaldehyde dehydrogenase (acetylating); KEGG: tjr:TherJR_1111 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; Aldehyde dehydrogenase.
  
 
 0.732
AEG16205.1
TIGRFAM: Delta-1-pyrroline-5-carboxylate dehydrogenase 2; KEGG: gct:GC56T3_0164 delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde dehydrogenase.
  
 
 0.714
AEG16957.1
TIGRFAM: Indolepyruvate ferredoxin oxidoreductase, alpha subunit; KEGG: pth:PTH_2846 indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup.
    0.698
AEG16956.1
TIGRFAM: Indolepyruvate ferredoxin oxidoreductase, beta subunit; KEGG: pth:PTH_2845 pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase.
 
  
 0.697
AEG16960.1
KEGG: pth:PTH_2849 aspartate/tyrosine/aromatic aminotransferase; PFAM: Aminotransferase, class I/II.
  
    0.532
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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