STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA1803Putative LuxR-family transcriptional regulator. (207 aa)    
Predicted Functional Partners:
ebA6051
Putative sensory transduction histidine kinase of highly complex domain structure.
 
 
 0.900
ebA6844
Sensory histidine kinase.
 
 
 0.895
ebA1807
ABC transporter, ATP-binding/permease.
 
    0.858
tcs1
Two-component sensor.
 
 
 0.850
ebA1805
HlyD family secretion protein.
 
  
 0.847
ebA5750
Putative sensory protein, two-component system.
 
 
 0.846
ebA5715
Two-component system sensor kinase.
 
 
 0.836
ebB52
Hypothetical protein.
 
     0.825
ebA791
Probable complex regulator protein containing response regulator receiver and signal transduction histidine kinase domains.
 
 
 0.816
ebA3727
Putative response regulator.
  
     0.772
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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