STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebB47Conserved hypothetical protein. (145 aa)    
Predicted Functional Partners:
ebB46
Conserved hypothetical protein.
 
    
0.616
ebA1675
Hypothetical protein.
  
     0.583
ebA1688
Conserved hypothetical protein.
 
     0.576
ebA1673
Predicted gram-negative bacterial type I secretion protein.
  
     0.485
ebA1666
Probable fusion of ABC transporter-type transmembrane and ATP binding protein.
  
     0.461
ebA1670
Putative Rotamase (prolyl cis-trans isomerase).
  
     0.461
ebA1694
Conserved hypothetical protein.
       0.425
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.