STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH02040.1TraG family protein; KEGG: bre:BRE_252 0.0046 leuS; leucyl-tRNA synthetase K01869; Psort location: CytoplasmicMembrane, score: 10.00. (669 aa)    
Predicted Functional Partners:
EHH02039.1
Relaxase/mobilization nuclease domain protein; KEGG: tin:Tint_2201 1.3e-15 DNA topoisomerase; Psort location: Cytoplasmic, score: 8.96.
     0.904
EHH02029.1
Conjugation system ATPase, TraG family; Psort location: Cytoplasmic, score: 9.12.
 
    0.812
EHH02031.1
Conjugative transposon protein TraE; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.807
EHH02026.1
Conjugative transposon TraJ protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.805
EHH02025.1
Conjugative transposon TraK protein.
 
     0.801
EHH01396.1
Conjugation system ATPase, TraG family; Psort location: Cytoplasmic, score: 9.12.
  
    0.776
EHH00216.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.776
EHG99633.1
Conjugation system ATPase, TraG family; Psort location: Cytoplasmic, score: 9.12.
  
    0.776
EHH00218.1
Conjugation system ATPase, TraG family; Psort location: Cytoplasmic, score: 9.12.
  
    0.775
EHH00221.1
Conjugative transposon TraJ protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.774
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.