STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG99410.1Hypothetical protein. (1469 aa)    
Predicted Functional Partners:
EHG99347.1
Outer membrane protein, OMP85 family; Psort location: OuterMembrane, score: 9.49.
 
   
 0.770
EHH01723.1
KEGG: pvx:PVX_080270 0.0035 hypothetical protein; K12603 CCR4-NOT transcription complex subunit 6; Psort location: OuterMembrane, score: 9.49.
  
     0.765
EHH01794.1
Hypothetical protein.
  
    0.749
EHG98444.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
     0.747
EHG98780.1
Hypothetical protein.
  
   
 0.746
EHH00483.1
Hypothetical protein.
  
     0.741
EHH00539.1
Hypothetical protein.
  
     0.734
EHH01481.1
Sporulation and cell division repeat protein.
  
     0.722
EHG99777.1
WD40-like protein.
  
     0.718
EHH00491.1
Hypothetical protein.
  
     0.710
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.