STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG98838.1KEGG: apb:SAR116_1869 5.0e-31 electron transfer flavoprotein alpha-subunit K03522; Psort location: Cytoplasmic, score: 8.96. (340 aa)    
Predicted Functional Partners:
EHH00372.1
KEGG: apb:SAR116_1870 7.7e-13 electron transfer flavoprotein beta-subunit K03521; Psort location: Cytoplasmic, score: 8.96.
 0.999
EHG98837.1
KEGG: apb:SAR116_1870 7.5e-21 electron transfer flavoprotein beta-subunit K03521; Psort location: Cytoplasmic, score: 8.96.
 0.999
EHG98839.1
KEGG: bth:BT_1806 2.9e-257 acyl-CoA dehydrogenase; K00257; Psort location: Cytoplasmic, score: 9.97.
 0.996
nuoD
Respiratory-chain NADH dehydrogenase, subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
 
 0.774
EHH00556.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: bvu:BVU_4008 4.6e-195 glutamate synthase, small subunit; K00266 glutamate synthase (NADPH/NADH) small chain; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.587
EHG99758.1
Glutamate synthase; KEGG: bth:BT_4310 0. putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; K00266 glutamate synthase (NADPH/NADH) small chain; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.587
EHG98185.1
E3 binding domain protein; KEGG: coc:Coch_0061 4.2e-91 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627; Psort location: Cytoplasmic, score: 9.26.
   
 
 0.552
EHH00630.1
KEGG: bvu:BVU_3787 0. pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.504
EHG98836.1
GDSL-like protein; KEGG: aca:ACP_0560 3.2e-45 rha1; rhamnogalacturonan acetylesterase; Psort location: Cytoplasmic, score: 8.96.
       0.466
EHG98840.1
UvrD/REP helicase; KEGG: eat:EAT1b_1102 2.4e-127 UvrD/REP helicase; K03658 DNA helicase IV; Psort location: Cytoplasmic, score: 9.97.
       0.466
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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