STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A163B4Y4Uncharacterized protein. (249 aa)    
Predicted Functional Partners:
A0A167QD21
RRM domain-containing protein.
   
 
 0.984
A0A162TTC6
RNA helicase.
   
 
 0.979
A0A162UAC7
Uncharacterized protein.
   
 
 0.979
A0A162UMT3
Brix domain-containing protein.
   
 
 0.979
A0A167KX43
Uncharacterized protein.
   
 
 0.979
A0A162TMJ8
Uncharacterized protein.
   
 
 0.978
A0A162TV89
Brix domain-containing protein.
   
 
 0.978
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.978
A0A167P1W3
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.977
A0A167R8Z2
Uncharacterized protein.
   
 
 0.977
Your Current Organism:
Phycomyces blakesleeanus
NCBI taxonomy Id: 763407
Other names: P. blakesleeanus NRRL 1555(-), Phycomyces blakesleeanus NRRL 1555(-)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.