STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mo06240Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (218 aa)    
Predicted Functional Partners:
Mo03634
Uncharacterized protein.
   
 0.998
Mo03633
RING-type domain-containing protein.
   
 0.996
Mo02101
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.983
Mo03993
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
  
 
0.973
Mo03370
Uncharacterized protein.
   
 0.971
Mo00735
Uncharacterized protein.
   
 
 0.966
Mo00264
RanBP2-type domain-containing protein.
    
 
 0.965
Mo05453
Uncharacterized protein.
   
 0.957
Mo02253
Uncharacterized protein.
   
 
 0.938
Mo02377
RING-type domain-containing protein.
    
 0.874
Your Current Organism:
Mixia osmundae
NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324
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