STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mo06067Uncharacterized protein. (917 aa)    
Predicted Functional Partners:
Mo04129
Uncharacterized protein.
   
 0.998
Mo05846
Uncharacterized protein.
    
 0.989
Mo03659
BSD domain-containing protein.
    
 0.976
Mo02165
Uncharacterized protein.
   
 0.963
Mo03443
Helicase ATP-binding domain-containing protein.
    
 0.918
Mo04528
XPA_C domain-containing protein.
    
 0.891
Mo01170
General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.
    
 0.876
Mo02803
Uncharacterized protein.
    
 0.858
Mo00105
Ubiquitin-like domain-containing protein.
    
 0.856
Mo02412
CIA30 domain-containing protein.
    
 0.856
Your Current Organism:
Mixia osmundae
NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324
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