Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADV65325.1 | ADV65327.1 | Desmu_1023 | Desmu_1025 | Integral membrane protein; InterPro IPR000834: IPR005242; KEGG: dka:DKAM_0861 predicted integral membrane protein; SPTR: Predicted integral membrane protein; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein. | KEGG: dka:DKAM_0859 hypothetical protein; SPTR: Putative uncharacterized protein. | 0.415 |
ADV65325.1 | prf1 | Desmu_1023 | Desmu_1024 | Integral membrane protein; InterPro IPR000834: IPR005242; KEGG: dka:DKAM_0861 predicted integral membrane protein; SPTR: Predicted integral membrane protein; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein. | Peptide chain release factor subunit 1 (aeRF-1); Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA. | 0.541 |
ADV65327.1 | ADV65325.1 | Desmu_1025 | Desmu_1023 | KEGG: dka:DKAM_0859 hypothetical protein; SPTR: Putative uncharacterized protein. | Integral membrane protein; InterPro IPR000834: IPR005242; KEGG: dka:DKAM_0861 predicted integral membrane protein; SPTR: Predicted integral membrane protein; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein. | 0.415 |
ADV65327.1 | ADV65328.1 | Desmu_1025 | Desmu_1026 | KEGG: dka:DKAM_0859 hypothetical protein; SPTR: Putative uncharacterized protein. | Glutamine amidotransferase-like protein; COGs: COG0121 glutamine amidotransferase; KEGG: dka:DKAM_1025 glutamine amidotransferase-like protein; SPTR: Glutamine amidotransferase-like protein. | 0.427 |
ADV65327.1 | prf1 | Desmu_1025 | Desmu_1024 | KEGG: dka:DKAM_0859 hypothetical protein; SPTR: Putative uncharacterized protein. | Peptide chain release factor subunit 1 (aeRF-1); Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA. | 0.703 |
ADV65328.1 | ADV65327.1 | Desmu_1026 | Desmu_1025 | Glutamine amidotransferase-like protein; COGs: COG0121 glutamine amidotransferase; KEGG: dka:DKAM_1025 glutamine amidotransferase-like protein; SPTR: Glutamine amidotransferase-like protein. | KEGG: dka:DKAM_0859 hypothetical protein; SPTR: Putative uncharacterized protein. | 0.427 |
prf1 | ADV65325.1 | Desmu_1024 | Desmu_1023 | Peptide chain release factor subunit 1 (aeRF-1); Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA. | Integral membrane protein; InterPro IPR000834: IPR005242; KEGG: dka:DKAM_0861 predicted integral membrane protein; SPTR: Predicted integral membrane protein; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein. | 0.541 |
prf1 | ADV65327.1 | Desmu_1024 | Desmu_1025 | Peptide chain release factor subunit 1 (aeRF-1); Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA. | KEGG: dka:DKAM_0859 hypothetical protein; SPTR: Putative uncharacterized protein. | 0.703 |